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A strictly DDN is inferred from available data using different reverse-engineering methods (so far FEED, Bayesian networks, ARACNe and CLR).
Ancestry blocks are strictly unobservable and can be inferred only from the data.
The equilibrium nucleotide frequencies of the HKY85 model can be chosen in several ways: The HKY85: π model uses the nucleotide content inferred from a strictly neutrally evolving reference sequence for both the test and the reference sequence.
Strictly speaking, transport pathway must be inferred based upon geological or geographic constraints.
Traditionally, the phylogeny of newly described or strictly sylvatic triatomine species has been inferred based on morphological comparisons.
It followed too that just as Plato denied the title of a (single unified) regime to the imperfect regimes torn by civil discord, so Cicero inferred that corrupt regimes were not strictly speaking res publicae at all (III.43 48).
For example, clades inferred from strategies that are not strictly topologically-based tend not to appear on trees that were inferred from strategies that are topologically-based.
Since cathepsin L is strictly acting as an endopeptidase [28], it can be inferred that the K R bond is preferentially cleaved (EYK↓REQEL).
We found that endogenous Akirin is strictly localized in the nucleus (Fig 3A J and Supplementary Figs S4 and S5) as inferred from previous overexpression experiments (Goto et al, 2008).
The objective of the experiment was to establish how well emission rate can be inferred by "inverse dispersion" (ID), using a Lagrangian stochastic wind transport model (WindTrax) that (strictly) is appropriate only in horizontally-homogeneous winds.
However, speciation with gene flow in reef fishes has only been inferred when there are strong ecological gradients [ 36], or where the fish are strictly associated with coral hosts [ 55].
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com