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(b) Stream-based data is often semi-structured (e.g. loosely coupled structure such as JSON) instead of following a strict database model [32].
We employed version 2.4C using the default strict database derived from UMLS version 2006AA as provided by the MMTx website.
Due to a very strict database search of D. magna against the D. pulex genome (e-value ≤ e-20, score ≥ 300, similarity between sequences ≥ 40%) only around 20% of these DE genes were assigned to functional genes.
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Therefore, we also utilised a second stricter database search strategy that located 809 gene families [see additional file 1 & additional file 6].
Strict relational database systems follow E.F. 'Ted Coddd's 'Twelve Principles of Relational Databases'.
In Taiwan, the Department of Health, the very active Bureau of Health Promotion, the Centers for Disease Control and other governmental administrative functions are linked in a network that allows a select set of professionals access to its database, under strict controls to secure privacy.
However, the approach (Fig. 1) does not have a strict dependency on one database type.
We also perform experiments on the standard LFW database using strict LFW protocol and show the improved performance of GRAB descriptor compared to LBP and Gabor descriptors.
We both introduce novel multiple-molecule query methods and compare these methods with previously described multiple-molecule query methods using public activity data sets, a public background database, a strict cross-validation protocol, and reproducible evaluation methodology.
All clinical, pathological, histological and molecular data were transferred to a central database after strict pseudonymisation.
The 'interaction cardinality matching' parameter specifies whether the binary interactions from the query network should be matched only with binary interactions from the database network (strict matching) or whether they may be matched to complex interactions, i.e. interactions of more than two proteins that contain the binary interactions.
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