Sentence examples for strategy for alignment from inspiring English sources

A critical decision is the choice of the appropriate strategy for alignment and assembly of the sequencing reads.

The strategy for alignment of RAD tags with the reference genome was also used for the 1,646 SNP markers with the 19 chromosomes for subsequent comparison.

We thank Dr. Rafael Irizarry for helpful discussions regarding strategies for alignment and evaluation of results.

Wang et al. sequenced the genome of a Han Chinese individual using combined strategies for alignment and assembly [ 26].

The second source of disagreement between these datasets is that different strategies for alignment of reads have an impact on the upper threshold for what is regarded as a small InDel.

In this paper we present a new alignment-free method for motif comparison, which was largely inspired by the strategies for alignment-free sequence comparisons [19].

Bowtie incorporates a strategy for read alignment, which evaluates mismatches based on base-calling quality: Unless the alignment of a query sequence is found without a mismatch at a particular position, a mismatch can be introduced.

Othman and Jemni [32] proposed a strategy for word alignment based on Jaro-distance and included it into a statistical machine translator for English to ASL.

Mauve uses an anchor-based strategy for genome alignment.

YAHA uses a 'seed and extend' strategy for DNA alignment.

When analyzing a previously published dataset of small RNA sequences [ 28], SRA: GSM72456[0 2], we used the same strategy for sequence alignment and annotation of the candidate regions.