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Each locus used one chain of 6,000 steps, sampling every 10 and discarding the first 1,000 as burn-in.
Geomorphometric analysis commonly entails five steps: Sampling a surface, generating and correcting a surface model, calculating land-surface parameters or objects, and applying the results.
Conventional A/D converters consist of two steps: sampling operation followed by digital quantization.
The analysis stage corresponds to the analysis of capacitive discharge current at the DC/DC converter and is composed of the following four steps: sampling, decomposition, and analysis (reducing and identifying parts).
For the final analysis, the program was run using 50 chains for a total of 5×107 steps (sampling every 100) following a burn-in period of 500,000 steps.
Again, this approach required two steps: sampling from the transmission model, then sampling from the observational model.
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Bayesian Markov chain Monte Carlo analysis was run for 200 million steps, sampled every 10,000 steps and the first 10% of which were removed as burn-in.
Each BEAST run was performed in the same way: single MCMC chain was ran for 40,000,000 steps, sampled every 4,000 steps and the first 10% was discarded as a burn-in.
The chain was 2.2M steps, sampled every 2k steps.
The analysis consisted of two simultaneous searches with heating temperature adjusted automatically with 10 initial chains of 5,000 steps sampled every 20 steps, followed by two final chains of 50,000 steps sampled every 20 steps.
Posterior probabilities (PP) were approximated by running four independent analyses of 1 × 108 steps sampled every 1 × 105 each.
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