Sentence examples for steps of genotyping from inspiring English sources

The microfabricated chip is a promising format for automating and miniaturizing the multiple steps of genotyping.

This step of genotyping included 19 microsatellite (MS) markers and 17 SNPs, located within a region spanning 14q11.2-q23 (Figure 1 and Table S1).

To further delineate the association, we performed the second step of genotyping focusing on IL-22.

These maps were then used as a reference for the subsequent steps of genotype assignment of the reads originating from the different crosses.

Then, a replication step of individual genotyping was conducted in an independent cohort of 259 cases and 288 controls.

After quality control filtering and SNPs ranking based on a false discovery rate (FDR) below 5%, we performed a replication step of individual genotyping to validate the top-ranked SNPs in an independent cohort of 259 endometriosis and 288 controls.

However the studies should be carefully designed from the very beginning in all the steps of the procedure: pre-genotyping, genotyping and the mathematical analysis of the results.

The preprocessing steps of preparing the genotype data were performed using eCAMBer, our previously published tool to support comparative analysis of multiple bacterial strains [ 13].

Because such an access is required by all genotype imputation methods, it is helpful to develop methods that impute summary statistics without going through the interim step of imputing genotypes.

Ad hoc qPCR experiments would confirm or refute the existence of the variants that failed NimbleGen validation and also determine the accuracy of the genotyping step.

In Holstein cattle, Schrooten et al. (unpublished data) reported that imputation error rate decreased by between 0.17 and 0.04% when moving from 200 to 500 HD genotypes by steps of 100, while in sheep, the decrease was 5% when moving from 50 to 150 individuals in the reference population but only 2% when moving from 204 to 2512 individuals [ 28].