Sentence examples for steps infer the from inspiring English sources

On a high level, our method consists of the following steps: Infer the entirety of all densely interconnected subgraphs whose genes are co-expressed (definitions see subsection "Densely Connected Biclustering: Problem Definition and Properties" below), DECOB algorithm, see subsection "DECOBRA: Algorithm" below.

It links the steps, infers the conditional criteria and initializes actions to be performed (patient data requests, data calculation, recommendation display...)...

The algorithm iterates in two steps: E-step, infer the posterior distribution of the variables at the internal nodes; M-step, update Q based on the inferred posterior distribution.

The first step infers the number of populations (K) and the second step holds K constant to assign individuals to populations.

This preliminary step infers the DNA fragment length per strand (ideally both strand-specific fragment lengths are the same); subsequently these are combined to define the read elongation parameter (see Additional file 2).

The algorithm treats the sequences at the ancestral nodes and mutational events along each branch of the tree as latent variables and iterates in two steps: (i) E-step, inferring the values of the latent variables conditioned on the current estimation of π.

We also used the BEAST program to create a Bayesian skyline plot with seven steps to infer the historical demography of C. simplicipinna.

To optimize this non-convex function, we iterated between two steps: (1) infer the 3D structure X; (2) re-estimate the distribution of contact counts μ ij between diploid chromosomes.

In the E-step, we infer the posterior mean of the compound latent variable y i = h i T, w i 1 T, …, w iJ T T as follows: E y i = L − 1 ⋅ Α ˜ T Σ ˜ − 1 ϕ ˜ i − μ, (15 where Σ ˜ is a block diagonal matrix whose diagonal blocks are Σ, and L−1 is the posterior covariance given by L − 1 = Α ˜ T Σ ˜ − 1 Α ˜ + I − 1. (16).

Therefore, the first step to infer the expression tissues of the intronic miRNAs in this way is to identify which intronic miRNAs show high co-expression with the host genes and which do not.

Our ability to detect several significant associations suggests that association mapping in the ancestral population can be used as an initial step to infer the function of some selection-candidate genes.