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We also used multiple regression (R package: stats; function: "lm") to test for an interaction between homoplasy and variability of data sets that may predict the proportion of nodes being shared between combined-data and mtDNA trees, once with the consistency index as our measure of homoplasy, and once with the retention index as our measure of homoplasy.
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For example, both geom_bar and geom_histogram use stat_bin as their core stat function, whereas geom_contour has stat_contour as its default stat.
Other approaches that directly inhibit STAT function, such as STAT dimerization inhibitors and STAT phosphorylation inhibitors, are under development, but none has undergone a clinical trial yet.
17 HCV protein expression in liver cells is associated with induction of the protein inhibitor of activated STAT (PIAS) expression and inhibition of STAT function.
The duration of STAT function is tightly controlled by several families of negative regulators including a family of classical feedback loop regulators – suppressors of cytokine signalling (SOCSs).
Alternatively, STAT function at certain sites may not require the cooperation of a kinase, but may depend, for example, upon the recruitment of specific coactivator/repressor complexes.
Usually, a geom is called to produce a ggplot layer, but it is possible to call a stat function directly to perform both the necessary statistical transformation and the rendering of the geometry through the geom = argument of the stat function.
Read-mapping stats from sam files were calculated with the ea-utils package and its sam-stats function [ 20].
PCA is using "stats" the function: princomp.
We used R version 2.14.0 and the stats::lm function for model fitting.
Analysis of variance (ANOVA) on these values was performed with the stats.f_oneway function in SciPy [ 54].
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