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(PDF 278 kb) Additional file 9: ArrayStar statistics on alignment of reads to Tcas3 (Total Reference bases - 32,060,158; Total Reference sequences - 18,428; Total Genome bases - 160,464,614).
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Summary statistics for alignment of Pinus taeda complete CDS sequences to assembled Pinus patula transcripts.
T-test statistics on mouse/rat intronic alignments indicates, that detected elements are on average more conserved as compared to other oligos, which supports our assumption of their functional importance.
Both the sequencer and the aligner provide certain statistics on the read and the alignment, which are used by LoQ uM to recalibrate the mapping quality scores.
The similarity of two reference proteins can be computed in various ways, e.g. based on mismatch statistics or alignment scores.
Table S2 TopHat statistics on RNA-seq read alignments.
The statistics on RNA-seq read alignments is provided in Table S2.
Alignment statistics for all alignments used in these analyses.
Focus on alignment.
The choice will depend on alignment.
Some of the more common tasks include computing statistics on a list of numbers, creating histogram files from data files (both numeric and string), converting alignment formats.
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