Additional file 2: Quality of reads and statistics of sequencing.
Statistics of Sequencing, Related to Figure 1 Table S2.
The statistics of sequencing quality is shown in Additional file 1: Table S1.
Statistics of sequence polymorphisms were performed using the DnaSP program version 3.51 [ 49].
The statistics of sequence acquisitions and alignments are presented in Table 1 and 2. GenBank: the NIH genetic sequence database.
In Karlin-Altschul statistics of sequence similarity, two sequences are optimally aligned by maximizing the similarity between them [ 41- 43].
The two HomPPI predictors [ 20], NPS-HomPPI (Non-Partner Specific) and PS-HomPPI (Partner Specific), depend on the correlation between conservation of interfaces and several BLAST alignment statistics of sequence pairs, discovered by PCA analysis.
This is not at all obvious from the other results we have presented in this paper, and could not be uncovered without these statistics on sequences of ISIs.
Sequence statistics of Illumina sequencing are listed in Table 1.
Further details of the statistics of erroneous sequences of different databases (organism, type of sequence errors, etc).
