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All statistics and graphics were performed using the statistical programming language R 2.15-2 2.15-2
Summary statistics for coverage and associated plots were conducted using the R statistical programming environment.
R is an open source statistical programming language.
Simulations were run in the statistical programming language R [30].
These techniques require specialized knowledge in statistical programming.
All other calculations were performed using the R statistical programming language[32].
The microarray data were analyzed in R, an environment for statistical programming and computing [28].
Microarray data was analysed using packages within Bioconductor [18] (http://www.bioconductor.org) that implement R statistical programming.
Sample to sample correlation matrices for each platform separately were calculated using R statistical programming environment.
Unless otherwise stated, all statistical analyses were performed using the R statistical programming environment [14].
All data analysis and statistical testing was conducted using the statistical programming language R [89].
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