Exact(7)
All sequences were identified by a method using Bayesian approach to statistical assignment [27].
While the scaffold is in place for this at the present time (i.e. BOLD [44]), further benchmarking of statistical assignment programs is necessary (e.g. [50]), as is the continued construction and maintenance of reference barcode libraries.
All clones were analyzed by direct amplicon TRFLP to unambiguously assign putative environmental clone taxonomic information directly to peaks in the experimental TRFLP dataset; additional specifics of the TRFLP, cloning, and statistical assignment methods used here may be found in Nelson [28].
The statistical assignment of proteins relies on the combination of a number of parameters to increase confident assignment of protein identifications.
For external validation, we used a leave-one-out cross-validation procedure and estimated the significance levels for correct statistical assignment of calls using post hoc 'bootstrapping' analyses.
To determine if the computational and statistical assignment had any significant effect on the students' understanding of the biological material, we compared scores of the pre- and postlaboratory quizzes using a paired t test.
Similar(52)
This is not unexpected as in comparison to microarrays, qPCR may report different statistical assignments [ 31].
Suppose one has obtained a list of candidate peptides from some analysis tools that provides only crude statistical significance assignment or no significance assignment at all, it is possible to upload this list of peptides along with the spectrum to RAId_aPS to get a reassignment of statistical significance via mode (iii) of RAId_aPS.
The generalized statistical traffic assignment (GESTA) model has a clear multi-level variance structure.
We are currently investigating the impact of the existence of these types of false positives on the statistical significance assignment.
When using search methods that do not have a theoretical model for the score distribution or when the quality of the score model [11] is poor, one may wish to use a more conservative statistical significance assignment.
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