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Most probable trees were selected based on three methods; approximate likelihood-ratio test (aLRT) statistics [ 39] implemented in PhyML and combination of 9 statistical analysis implemented in CONSEL [ 40] in the maximum-likelihood methods, and 95% highest posterior density (HPD) in Bayesian MCMC.
The results show that by using statistical analysis implemented using the MapReduce framework, the inversion-based chunking methods can outperform predictions using the whole sequence.
Significant differences in spot intensities between CIS-t and CIS-s were evaluated by statistical analysis implemented in the Delta2D software using the "between samples" T-Test assuming different group variances (Welch approximation) and without correction for multiple testing.
Using the MHP protein MSA and this MHP gene phylogeny, statistical analysis implemented in the software DIVERGE v 1.04 [ 66, 46], was used to estimate the coefficient of functional divergence (theta ML or θ) for all pairs of clusters.
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A basic statistical analysis was implemented by the SPSS16.0 software (SPSS Inc., Chicago, IL, USA).
When statistical analysis is implemented, it is also necessary to verify the model behavior in the corner cases.
Comparison criteria and statistical analysis were implemented to understand the effects of the "Dark Horse" on the final solution.
Statistical analysis was implemented in MATLAB (version 6.5, MathWork, Natick, MA), and SPSS SPSSS for Windows, Rel. 12.0.1 . 2001 Chicago: SPSS Inc).
Simulation models and statistical analysis are implemented with the statistical software R (R Core Team 2013).
The statistical analysis was implemented using STATA® version 12 (StataCorp, Texas, USA).
The power statistical analysis was implemented by the G∗ power 3.1.5 tool [ 28, 29].
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