Sentence examples for static docking from inspiring English sources

MD may also be employed prior to macromolecular docking to generate conformations, which become the initial point for static docking.

While a few caveolae remain static (permanently docked with the plasma membrane), several caveolae undergo fusion and detachment with the plasma membrane within a small volume beneath it (Video S1).

It is becoming more and more evident that their versatile roles in signal transduction extend beyond the original and relatively static definition of a docking protein.

As expected from docking to static proteins, hBChE variant residues on the periphery of the protein such as D340H, or even Y332S, had a minimal effect on the binding orientation of the ligand in the active site.

Traditionally, many ligand models, typically taken from a database of compounds that can be easily synthesized or commercially purchased, are docked into a single static receptor structure, often obtained from NMR or X-ray crystallography.

We performed docking of ADP to the static equilibrated unacetylated structure and used this system as an input for two further simulations.

One promising approach to implicitly incorporating protein flexibility is to dock against an ensemble of static protein structures [ 32].

When I moved my iPod from the main unit to the wireless transmitting dock there was no interference or static; it sounded the same.

The results demonstrated that cefotaxime was a static quencher of tyrosinase and that cefotaxime could dock favorably in the active site of tyrosinase.

In addition to ensemble docking, we also docked ADP to the static equilibrated wild-type system.

The MD simulation protocol used in our work, followed by ensemble-flexible docking, has gone beyond the use of static models and allowed for a more detailed exploration of the OX structures.