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AVFs apply these patches to the windows virtual machine by wusa (Windows Update StandAlone) command.
Homologs were identified using standalone command line BLAST (version 2.2.29) [ 46].
The protein disorder module is distributed both as part of the BioJava library and as a standalone command line executable.
The library can be used as a standalone command line tool for model conversion, and can be accessed at https://github.com/colomoto/logicalmodel.
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All 13 models were implemented in MATLAB and compiled into OPERA, a standalone command-line application for Microsoft Windows and Linux [68, 69].
The WiggleTools library can be used as a C library but also as a standalone command-line tool.
The RNAcon web-server and standalone (Linux-based command-line mode) both are freely available for the help of global scientific community and available from http://crdd.osdd.net/raghava/rnacon/%20web-address.
The program was implemented both as web-server and as a standalone program with the command line interface.
As a standalone company, something that big growing that fast would command a valuation approaching $150 billion.
The standalone company will be called Zoetis.
Genome searches were conducted using standalone BLAT (v35) fast sequence search command line tool [ 74] and GeneWise (v2.2.0) was used as a homology based predictor of gene structure [ 75] with chicken and green anole α-keratin sequences downloaded via NCBI (Additional file 6).
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