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Public zebrafish RNA-seq data sets from early developmental stages were downloaded from GEO with accession number GSE22830 [ 34] and Sequence Read Archive ERP000400 [ 35].
Genome-wide public RNA-seq datasets (Reads/Kb/Million (RPKM) normalized data) for soybean developmental stages were downloaded from soybean RNA-seq Atlas [ 57] and Gene Expression Omnibus (GEO) database (accession number GSE29163) from Goldberg et. al. (Unpublished).
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Data for Arabidopsis gene expression in different tissues and under different developmental stages was downloaded from AtGenExpress database http://jsp.weigelworld.org/expviz/expviz.jsp.jsp
Tissue and developmental stage information were downloaded from the NCBI Library Browser classification.
To generate the expression profiles of ZmPPs among different organs and development stages, the RNA-seq data were downloaded from the NCBI Short Read Archive with accession number SRP010680 (http://www.ncbi.nlm.nih.gov/sra/).nih.gov/sra/
No lawsuits were "downloaded".
All data were downloaded in February 2013.
PhastCons conservation scores were downloaded from the UCSC download pages.
The 181 papers were downloaded.
Data were downloaded in October 2013.
Citations were downloaded into an Endnote library.
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