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Each SNP is detected as variation within the stack of mapped short NGS reads at a locus, rather than a difference between an invariant stack of mapped NGS reads and reference sequence.
Hence, observing two different nucleotides at a nucleotide position in a stack of mapped reads should be used as evidence for an SNP.
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It must fail if addr is not page-aligned or if the range of pages mapped overlaps any existing set of mapped pages, including the stack or pages mapped at executable load time.
To address these problems, we devised novel strategies that utilize next-generation sequencing and Stacks software, which converts short-read sequences into called genotypes (Catchen et al. 2011), to economically create genetic maps containing many thousands of mapped markers.
92.8% of mapped incidents occurred between 2014 and 2016.
Black curves denote the surface trace of mapped faults.
The gray lines indicate the location of mapped faults.
Figure 2: Alignment of mapped reconstructed contigs against CO92 and Microtus genomes.
Average DNA lengths of mapped sequences reads were 94.5, 102.2 and 76.9 bp, respectively.
Kumar, V. et al. Uniform, optimal signal processing of mapped deep-sequencing data.
Of the 153,497km of mapped roads that cross the territory two-thirds the size of Europe, only 2,749km are paved.
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