Sentence examples for splicing position from inspiring English sources

We analyzed the splicing position sequences producing the CD46-TV transcript, and found that the retained 48 bp sequence conformed to the conditions of an alternative exon and had the potential for alternative splicing.

When two adjacent overlapping fragments have near perfect sequence similarity and no splice signals to identify the exact splicing position, there can be multiple overlap split positions with equal updated fragment scores.

The amino acid sequences surrounding the conserved splicing positions are shown in blue boxes in Figures 8 and 9.

The exon sizes and the splicing positions are similar in both genes, except for exon 3 which encodes an additional amino acid in ZmTCRR-1.

A junction read could be either mapped as a non-junction read, or remain mapped as a junction read but with different start, end, and splicing positions; (3) "Multiple", a uniquely mapped read became a multiple-mapped one.

After removal of contaminants (28S, 18S, and 5S rRNA; mitochondrial chromosomes; PhiX; Illumina controls; and Illumina adaptors), reads mapping to multiple splicing positions, and reads with no match, we obtained between 32 and 42 millions of reads that were used for the generation of the raw data file (Table S1).

In the event of multiple equally probable splice positions, the splice position with the shortest second piece is selected.

The most probable transition point from State 1 to State 2 defines the optimal splice position.

Once the splice position has been determined, the first exon-intron boundary has been identified.

Once a read-half is aligned, a Hidden Markov Model (HMM) is used to detect the most probable splice position.

To avoid this type of error, HMMSplicer utilizes a two-state Hidden Markov Model (HMM) to determine the optimal splice position within each read.