Sentence examples for speed up model from inspiring English sources
All the above functionalities will speed up model generation, provide reproducibility and tests of robustness.
We choose Collada as the intermediate format, an XML-based common 3D scene exchange file, which can be compiled into a binary format to speed up model loading and editing.
For instance, improvements to internal interfaces now speed up model input/output operations.
We propose efficient data sampling algorithms and methods for early pruning of hypotheses to speed up model selection.
PyBioS integrates templates for model development and annotation, as a way to automatically take advantage of basic biological knowledge and publically available databases such as Ensembl (http://www.ensembl.org, [ 86]), Reactome (http://www.reactome.org) and KEGG [ 87], to automate and speed up model development.
While this problem is mostly avoided by a stringent requirement in MBA for model consistency (i.e., all reactions in the final tissue-specific model must be capable of carrying flux), a more deterministic and simulation-independent ranking of non-core reactions would serve to dramatically speed up model construction time.
Further, we also eliminate redundancies in the original MDP in order to speed up the model reduction phase.
Although their algorithms using this probabilistic model take them in a different direction, I suggest that the methods described here could be used to significantly speed up the model building phase of BEAGLE.
To speed up metabolic model development for a large number of microorganisms, we need a user-friendly platform to construct metabolic networks and to perform constraint-based flux balance analysis based on genome databases and experimental results.
