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There were substantial differences between this dataset and ours, namely its source (frozen tissue specimens), array platform (Agilent), smaller sample size and event number, and the fact that metastasis was reported as a binary, not time-censored, outcome.
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As an efficient, space-saving method to cool the container and the material specimens, an array of mini-channels (1 mm gaps) through which low pressure (0.3 MPa) helium gas is flowing is established.
In summary, we used a novel approach to analyze the data obtained with flow-sorted tumor specimens using array CGH, which provides a new insight into the genomic complexity of breast cancer.
Single cantilever beam specimens incorporating arrays of FBG sensors are subjected to monotonic and fatigue debonding tests.
As specimens were arrayed in quadruplicate a median HMG-CoAR autoscore was calculated for each tumour.
Two 1.0-mm diameter cylinders were punched from each of the 105 specimens and arrayed in three tissue microarray blocks.
Whole specimens were arrayed in batches of 95 for databasing, photography, and tissue sampling, according to standard methods for high-throughput processing of specimens for DNA barcoding [ 67].
Tumor tissue specimens were arrayed (3 cores per case, 0.6 mm in diameter) into a recipient paraffin block using a manual arrayer (MTA-1, Beecher Instruments, Sun Prairie, WI, USA).
To decrease error introduced by sampling and to minimize the impact of tissue loss during processing, duplicate tissue cores per specimen were arrayed on a recipient paraffin block.
Next, using these H&E slides for reference, four 0.6 mm core biopsies were taken from each tumour specimen and arrayed on a recipient paraffin block using a tissue microarrayer (Beecher instruments, Silver Spring, Maryland, USA).
Up to now a large number of microarray data has been collected in public repositories such as GEO (Gene expression Omnibus of NCBI) or ArrayExpress (EBI) referring to a wide variety of different conditions, specimen and array-types.
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