Optical properties of each specimen are computed from their spectra of dielectric function, refractive index, extinction coefficient, normal incidence reflectivity, optical conductivity, optical absorption coefficient and energy loss function.
Optical properties of each specimen are computed from the spectra of dielectric function, refractive index, extinction coefficient, normal incidence reflectivity, optical conductivity, optical absorption coefficient and energy loss function.
The multivariate measure of size (centroid) of each specimen is computed as the square root of the sum of squared inter-landmark distances [65].
A reference specimen is computed and established as the mean of the fitted landmark coordinates.
The sum of all fields in the specimen was computed and automatically analyzed with the QUIPS software.
Assuming uniform stretch throughout each specimen, the PR for each element within each EOM specimen was computed from the CSAs and actual elongated length.
Then, the "effective library size" for each specimen was computed by normalizing the library size of each specimen (total number of aligned reads) using the TMM normalization factor.
Then, the scores for each specimen are computed as the covariance of each mean-centered specimen on the line-circle vector eigenshape.
When a mutation was identified, the percentage of the candidate mutant gene in the specimen was computed using a built-in formula specific for each mutation.
The following optical properties of the specimens were computed using the Kramers-Krönig framework and discussed: absolute reflection and transmission coefficients for a single wavelength and relative ones for the wide UV-VIS-IR spectra, spectral dependence of the refractive index, and extinction coefficient as real and imaginary parts of the complex refractive index.
