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Since 2004 it has provided a single point of access to specimen data from databases of biological surveys and collections.
We developed a curation workflow for the collection of character, taxonomic and specimen data from these publications.
The BPCS uses specialised codes that, by intent, separate the specimen data from the clinical data to maintain patient anonymity.
Although much of the data used in phylogenetic analysis is acquired from databases in other fields, particularly specimen data from museum collections [ 3] and sequence data [ 2] such as those available at NCBI [ 4], the results of phylogenetic analysis are not as easily accessible.
DIAL extracts raw specimen data from ProvLab's Laboratory Information System and with its built-in automated interpretation engine, provides clinical interpretive results for specific pathogens.
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In the examples given in the following sections, specimen data were recorded from dog or rat cardiac ventricular myocytes loaded with either fura-2 or fluo-3.
The times from specimen data entry into the laboratory information system to result reporting were calculated by extracting data from the Laboratory Information System (Medipath, LRS Health; Melbourne, Victoria, Australia) with an integral analytic software module.
Species averages were then calculated from specimen data so that each tip on the phylogenetic tree is represented by a single shape point [ 3].
Although CEA expression appears to be similar between our xenografts and the majority of human pancreas cancer specimens, data from xenograft models are limited secondary to lack of a competent immune system.
NTM was cultured from between 0.4-2.0 0.4-2.0 specimens (data from four countries).
We thank H. Frahm for useful comments, advice and making specimen specific data from Stephan et al. [37] available.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com