Sentence examples for specifying pathway from inspiring English sources

The differences between two search functions are: (i) Search allows for searching by more than one gene or keyword, (ii) search allows the use of the empty text field returning all genes in the database and (iii) search includes alternative options to constrain the query by specifying pathway information, e.g. cellular location and process.

On the basis of these strategies, we suggest a model specifying pathways to effect.

Thus, the network is established without explicitly specifying pathways.

The genes in the specified pathway are graphically represented as a color-coded diagram.

R i is the rank of the ith gene of the specified pathway in a list, r i is the absolute correlation value r.

ParaRate is similarly defined as the total number of corresponding paralogous genes within a specified pathway from the query species divided by the total number of associated genes within the identical pathway from the reference species.

OrthRate is defined as the total number of corresponding orthologous genes within a specified pathway from the query species divided by the total number of associated genes within the identical pathway from the reference species.

No relationship between the specified pathways simplifies the correction for multiple hypothesis testing.

It has been estimated that 15 to 25% of the plant genome specifies pathways of natural product biosynthesis [ 51].

Pathways listed are identified enriched pathways for indicated phenotypes; numbers in square brackets indicate the Kyoto Encyclopedia of Genes and Genomes (KEGG) identifiers for specified pathways.

The complexity of the response required a system-wide approach to data analysis, so the MetaCore™ software (GeneGo, Inc., St. Joseph, MI, USA) was used to assess the significance of changes in expression of genes in specified pathways [ 70, 71].