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Additionally, the user specifies a query file with either single molecule maps or consensus genome maps.
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For example, the end user can specify a query by the following soft conditions: Select SM = "wildfire susceptibility map".
We describe a new similarity search interface, in which users specify a query by simply placing events on a blank timeline and retrieve a similarity-ranked list of results.
An advantage of specifying a query sequence in advance is that the repeats present in protein sequences can be properly dealt with.
Though GeoDCAT-AP itself does not specify a querying mechanism, it can be queried if loaded in a SPARQL endpoint.
The orchem:queryType parameter specifies a type of query structure; the default value is SMILES, which denotes Simplified Molecular Input Line Entry Specification [32].
The web interface provides a browse feature that uses filters to go through data displayed in a tabular format without specifying a search query.
After selecting datasets using the searchable dataset-select box, users can specify a filter query that is applied to all datasets before the comparison.
For example, the user can specify a similarity query through a URI format, with the option to select the desired molecular format, choose between a set of molecular fingerprints and additionally select (in the case of similarity searches) which similarity coefficient wants to be used for calculating the final scores.
2. a Molecular Interactions Query Language (MIQL ), that specifies a syntax to allow flexible queries.
The basis of ranking is that documents are scored according to evidence of relevance to an information need, typically specified by a query.
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