Sentence examples for specified branch from inspiring English sources

Pruning branches were identified in the reconstructed trees using a simplified two-step pruning rule; (i) maintain specified branch spacing and (ii) maintain specified branch length.

What makes the specified branch privileged?

But first of all some comments on the very idea of a specified branch.

However, as we shall see in the following, it turns out that the idea of a specified branch at every moment can be integrated into the semantics in several ways.

The reason why F x q is true at t2 is just that the evaluation of a proposition according to the true futurist theory should be based on the specified branch through t2 representing 'the future' at t2 within the model.

In the past week there's been a spike in attention, especially due to the anniversary coinciding with the final, inexorable march to 4,000 — but for one very specified branch of the media these are the headlines that matter every day and with every number: The military media.

The CODEML program in the PAML package [78] was used to run the branch-site-specific model A, test 2 [77], which infers selection on codons along specified branches.

Zhang et al.'s branch-site test 1 (model A vs. M1a) can be positive when positive selection or relaxed selection is occurring along specified branches, while branch-site test 2 (model A alternative vs. model A null; also known as the branch-site test for positive selection) tests specifically for positive selection along specified branches.

More complex models assume an independent ratio for each lineage (free-ratios), variable ratios for specific classes of sequence sites (site-specific), or variable ratios for specific classes of sequence sites along specified branches (branch-site specific) [ 53- 57].

The test compares a model that assumes positive selection on one branch or on a set of a priori specified branches (hypothesis H1) with a null model that does not incorporate positive selection (hypothesis H0).

Substitution counts given along specified branches are the estimates made in the free ratio model, but were also calculated by directly comparing the predicted ancestral and the known extant sequences and counting differences manually.