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The sensitivity and specificity of different tools in detecting known or novel miRNAs appear different among different species of data.
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It is true that, for many species, lack of data may constrain the potential to use these new methods.
Such data were available for 28 strictly North American species of our data set.
The reference pathways listed in MetaCyc v13.5 included 1600 species and PlantCyc v3.0 available from Plant Metabolic Network (PMN) project (Zhang, Dreher et al. 2010a) included approximately 300 species of pathway data as reference.
A split is a bipartition in a species set, which separates two groups that comprise together all species of the data set [ 129- 132].
Application of PCR product containing a mixture of two apparently different products to a denaturing urea gel resolves a single size species of DNA (data not shown).
Finally, to our knowledge, two species of our data set (O. tauri and C. merolae) have not yet been studied for their sterol composition.
Our study complemented the genome-wide analysis conducted to date by adding a meta-analysis performed across species of expression data related to PPARα signaling.
Four botanical families are particularly represented (families that contain more than 5% of the species included in the database): Asteraceae, Fabaceae, Myrtaceae (mainly the genus Eucalyptus) and Pinaceae; together they include 47% of the species of the data set.
ENMs relate known occurrences of species to data describing landscape-level variation in environmental parameters of importance to species' distributional ecology, resulting in models of inferred environmental requirements.
Interpreting the various lines of evidence linking RNF14 protein to immune and mitochondrial functions is complicated by the cross-species sources of data.
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