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Further, the proportion of all species' core areas in primary forest exceeded the proportion of home ranges in primary forest.
Furthermore, the increasing accumulation of worldwide data sets on species' core and soft traits (surrogates to determine core traits indirectly) on one side and the refinement of conceptual frameworks for animal functional types on the other side will further improve functional type approaches which consider the sensitivities of multiple species to climate change, habitat loss, and fragmentation.
Based on the 13 C. jejuni genomes available, and using a method previously described [39] for extrapolating the boundaries of core and pan-genomes, we estimate the total species core genome to stabilize no lower than 608 gene families.
Indeed, for the TRPM8 species orthologs examined in this study, we found a striking correlation between the species' core body temperature and the temperature required to observe half-maximal TRPM8 activation, suggesting that the biophysical properties of TRPM8 in each species are tuned to the most appropriate temperature range.
By definition, the bacterial pan-genome consists of the set of genes that can be found in all strains of that species, i. e., the species' core genome, and the accessory genome which is composed of genes that vary between strains [25].
To investigate the phylogenetic relationship between Porphyromonas species, core sequence and gene content methods were applied.
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Currently there are more than a hundred bacterial species for which sufficient genomic data are available to estimate the species core-genome (that is, there are at least three genomes sequenced from the same species) [ 14].
Although the diversity of the genus remains largely unexplored, several studies have shown that A. baumannii gene repertoires are very diverse, with fewer than half of the genes being part of the species' core-genomes (Adams et al. 2008; Imperi et al. 2011; Sahl et al. 2011; Farrugia et al. 2013).
We focused on the 118 candidates retrieved for all 12 mammals, and we chose among exons with a length ranging between 800 1500 bp for the three-species core (human, mouse and dog), with an intermediate relative rate of evolution, i.e., SDM value ranging from to 0.8 to 1.2.
Our result should not be regarded as a disagreement with earlier results, because our goal is only to provide additional support for the proper placement of Kutzneria albida among other Pseudonocardiaceae – we are not aiming at the identification of the 10-species core genome.
For these two species, the core zone was the most important refuge, so continued conservation of this zone is important for the preservation of these species.
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