Sentence examples for source of alignment from inspiring English sources

Heuristics present another source of alignment errors especially for short queries, because only a few valid unique seeds may exist between the aligned sequences.

In order to identify de novo mutations, we consider that the best option is to maintain those sequences that match equally to more than one location, even though it could be a source of alignment errors due to homology between regions.

The large number of OTUs is potentially a biased source of alignment and phylogeny artefacts that could disrupt eukaryote monophyly.

This heuristic is the major source of alignment errors especially for short queries when there are only few valid unique seeds between the sequences to be aligned.

To exclude co-optimality of MSA as a potential source of alignment error, we further performed the Heads or Tails (HoT) analysis [ 58] on the identified orthologs.

SAM has been used as a source of alignments for protein structure prediction to participate in the CASP structure prediction experiment and to develop a database of predicted proteins in the yeast species S. cerevisiae.

The sources of alignment error are reported.

We had to develop model alignments as we started from gene families and not from a source of curated alignment as in PFAM [ 23].

The approach can be expanded to allow for movement of bound entities together, i.e., filaments, instead of fixing their position in the event of binding, to find ways of representing the cellular stress to be the source of orientation alignment, and to speed up the simulation to allow more simulation runs with more realistic protein sizes and consequently many more proteins in the system.

For instance, RIO [ 18] starts from PFAM [ 23] as a source of curated alignments.

By using finite-conjugate imaging rather than the usual infinity-corrected objective lens, a tube lens is not required, removing a source of cost and alignment error.