The core regions were sorted into clusters according to their pair-wise nucleotide sequence identity using the program GROUPER (unpublished software, 2004; Armstrong, JS and Gibbs, AJ) with a clustering cut off point of 85% identity.
Discordant reads were sorted into clusters then separated into subclusters that supported the same rearrangement junction.
Further analysis revealed that these 24 highly expressed novel miRNAs could be sorted into Clusters I through VI.
These complexes are sorted into clusters based on the root mean squares (RMS) cluster tolerance (2.0 Å used in this work) between structures.
The aligned sequences were sorted into clusters, where each cluster contained one or more reads with unique sequence (Additional files 1, 2).
The conformers are sorted into clusters, the cluster having the largest size is removed from the conformer pool, and the algorithm is run again on the remaining conformations.
After normalization and statistical analysis of data, 631 differentially expressed genes were sorted into clusters based on their levels and kinetics of expression using Spotfire® profile search and K-mean cluster analysis.
Island populations predominantly sorted into clusters with under 0.5% internal divergence, but higher intra-island divergence, up to 3.1%, occurred in four species (H. anthracinus, H. crabronoides, H. flavipes, and H. specularis).
All spikes recorded at a single microwire electrode crossing a threshold two standard-deviations over baseline (spike wavelength around 1 ms and interspike interval greater than 2 ms) were sorted into clusters using PC analysis and were considered to represent individual units.
His method, which he calls mass or multilateral comparison, is to compare many languages simultaneously on the basis of 300 core words in the hope that they will sort themselves into clusters representative of their historical development.
