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Dr. Wattenberg, a computer scientist and mathematician, says sophisticated visualization tools have historically been the province of professionals in academia, business and government.
However, these sophisticated visualization tools are specialized in handling intraspecies alignment results (i.e. query and reference are same species).
While PyMol and VMD also combine a scripting environment with sophisticated visualization tools, they are primarily geared toward visualization and less on providing a clean application programmer interface (API) that is easy to use and allows for rapid development of new algorithms.
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EPIPOI can assist public health officials and students to explore time series data using a broad range of sophisticated analytical and visualization tools.
Caleydo also features sophisticated gene expression visualization tools such as a parallel coordinates browser, which can be used to filter a dataset of interesting genes, and a hierarchical heat map (Fig. 1).
Although less sophisticated than other chemical space visualization tools designed to assess compound collections [40 46], webDrugCS provides an unprecedented tool to look at DrugBank and rapidly learn about the structural diversity of small molecule drugs.
BioSunMS provides basic visualization tools and advanced processing algorithms.
To provide researchers with an easy access to network visualization tools, several network analysis software come with sophisticated methods for laying out networks.
There's a good collection available including: –Web sites like Many Eyes or Gooddata; –Statistical analysis and visualization tools including "R" that can churn out incredibly sophisticated charts; –Databases such as MySQL or PostgreSQL will help you build a data warehouse; –Charting packages that are part of almost every major scripting languages.
Sushi fills a critical void among currently available visualization tools by providing a means to easily produce sophisticated, customizable, genomic visualizations.
In contrast to other visualization tools the described software is to be exhibited in a public space without the possibility of sophisticated user interaction.
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