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Second best was the research software followed by the clinical software (Table 1 ).
qRT-PCR primers were designed using the Beacon Designer 7 (Biosoft, USA) software (Table 1).
A change matrix (Weng 2001) is also produced in ERDAS Imagine 2013 software (Table 4).
The ML was set as the reference point for the measurements; measurements were obtained using the 3D ruler of OnDemand3D® software (Table 1).
The results obtained from CCD were entirely examined by means of analysis of variance (ANOVA) by Design Expert software Table 4.
Primers were designed using Beacon Designer 7 software (Table S7).
Gene-specific primers were designed using ArrayDesigner 2.0 software (Table S2).
Reconstruction of haplotypes was performed with the UNPHASED software (Table 4).
The primer pairs were designed by Vector NTI software (Table 1).
Focussing on these two major clusters, we used DAVID software (Table S2) to conduct a gene ontogeny analysis [20], [21].
Primers were designed with Primer Express 2.0 software (Table 4) or pre-designed by Applied Biosystems (TaqMan® Gene Expression Assays).
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