It is implemented as a Perl script and makes use of the R software environment for graphical output.
This has required the development of standardized languages and software tools for graphical representation of molecular interaction maps and computation of predictive and dynamic models [ 101- 105].
Summary: New software tools for graphical genotyping are required that can routinely handle the large data volumes generated by the high-throughput single-nucleotide polymorphism (SNP) platforms, genotyping-by-sequencing and other comparable genotyping technologies.
Voorrips, R. E. MapChart: software for the graphical presentation of linkage maps and QTLs.
MapChart 2.2 software was used for graphical visualization of the linkage groups [ 28].
Excel® 2010 (Microsoft) and J.M.P.® 10.0.0 (SAS Institute) software were used for graphical representations and to perform statistical analysis across all experiments and for survival analysis.
The statistical package 'R' (V3.1.1 for MacOSX, R foundation for statistical computing, Vienna, Austria) with 'RStudio' (RStudio Inc., Boston, MA, USA) was used for the analysis, Prism (V6.0d for MacOSX, GraphPad Software, La Jolla, CA, USA) for graphical presentation of the results.
For example, CellDesigner is a software package for the graphical editing of biological pathway diagrams [ 20].
EL developed the software for obtaining the graphical results of the manuscript and performed the numerical experiments for the characterization of the longitudinal wave speed velocity variation.
