Sentence examples for small coverage threshold from inspiring English sources

Because of the additional information encoded in the modified de Bruijn graph, one can use here a relatively small coverage threshold.

Fourteenth of 30 samples showed low coverage threshold at rs1736442.

Much like the contig correction phase, several filters are applied to the scaffold: static coverage thresholds for the very low coverage sequences and a dynamic coverage threshold that adapts to the local coverage depth.

If the number of mitochondrion-encoded sequences was too small to generate a PSSM, a protein BLAST (BLASTP with an e-value threshold of 1e-4 and a coverage threshold of 30%) search was performed.

Also, a query coverage threshold of 70% identity was used to discard low coverage/ambiguous homologous protein mapping.

Besides, treatment units just serve patients that are in their coverage threshold, while this threshold is affected by several factors.

Lowering the coverage threshold to 3 increases the overlap between our data and dbSNP from 91.3% to 93.7%.

Default parameters (e.g. reference set, coverage threshold, etc).

Therefore, we set our coverage threshold to 30×.

The decision value, d, is determined by consideration of N, two coverage thresholds – the lower threshold (LT) or minimum acceptable threshold and the upper threshold (UT) or desired coverage threshold–, and acceptable probabilities of classification error (α and β).

For each coverage threshold, five randomly downsampled data sets were created and coverage was assessed using GATK DepthOfCoverage.