Our neighborhood operator overcomes this limitation by defining the pixels in terms of varied sizes of overlapping regions.
The combination of higher laser power, lower scanning speed, smaller size of overlap, and the longer length of scan were influenced the formation of mixture of phases (martensite, bainite, ferrite, and pearlite) which in turn affected the case depth hardness uniformity.
A number of heat treatment experiments by changing the laser power (1400 1800 W), scanning speed (15 25 mm/s), size of overlap (1 6 mm), and the length of scan (10 30 mm) on the tool steel AISI S7 were carried out by using a 2-kW direct diode laser.
Association between enriched terms was calculated based on the size of overlap between sets of genes belonging to different terms, and visualized using Cytoscape [ 26].
In order to be fair, as stated above, we excluded clusters whose size of overlap with curated complexes is less than two proteins.
The proportion of shared top genes comparing Agilent versus 29K unadjusted and Agilent versus 29K intraplatform adjusted, respectively, is visualized in Figure 4(a) to provide a qualitative illustration of the size of overlap.
In addition, query-specific information are available for each query such as size of overlap with DHS regions actual loci of predicted TF binding motifs, and the source of TF ChIP-seq data.
Our results suggest a relatively high turnover of the properties of adjacent gene pairs, including the creation and loss of overlap between coding sequence of proteins, and relatively rapid variation of the distance separating the coding sequences, including the size of overlaps.
Antisense ncRNAs exist for many S. cerevisiae genes; combining published datasets we found that 15 30% of yeast open reading frames (ORFs) have an annotated antisense ncRNA depending on the minimum size of overlap considered (Xu et al., 2009; van Dijk et al., 2011), not including overlapping convergent ORFs.
