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We also created a segregating sites graph to examine the distribution of mutations throughout the population.
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An association graph edge is created between two association graph nodes if the binding-site graph edges connecting the corresponding pairs of atoms in each binding-site graph are similar.
In a site graph, vertices represent material components of proteins, such as sites of binding and chemical modification.
The domains and motifs of a signaling protein correspond to vertices of a site graph, which provides a representation of the protein analagous to the graphs used to represent atomic structures in chemistry.
Site graphs for eastern study sites (a g).
Site graphs for western and Midwestern study sites (a d).
Rules, which are composed of site graphs, describe interactions among components in a precise way.
Mutations at site 179 seem to interact with NRTI mutations at site 74 (graph (q)).
The two field sites yielded graphs more complex and with less historical contingency than the idealized sequence.
Facebook's feed can show off-site Open Graph app activity, new friendships, Event RSVPs, Likes of Pages and much more.
However, as evidenced by the lower density of ties between CCG board members (0.622) there was an element of competition between the CCG leaders who represented the former PBC groups, indicated as the larger blue circles in the social network diagram (site B graph on the right of figure 4).
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