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LC-MS was used to determine the site specific alterations in N-linked oligosaccharides in oesophageal cancers [ 137].
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However, they do not account for these site-specific alterations in a systematic, quantifiable and transparent way.
Although the DNA methylome is generally stable during aging, site-specific alterations of DNA methylation occur at genomic regions associated with hematopoietic lineage potential and selectively target genes expressed in downstream progenitor and effector cells.
Oligonucleotide-directed mutagenesis is one of the most popular methods to introduce site-specific alterations into a DNA sequence.
Merali et al. [ 90] suggested that in a sample of 30 suicides and 37 controls, suicides were associated with site-specific alterations in the endogenous levels of CRH, AVP, GRP, and NMB.
However, in recognition of the specific needs of some cancer groups, the panel acknowledged that there should be some cancer site-specific alterations for patients and caution was advised for those at increased risk of fracture and infection [ 37].
This would fit the previous observation of a species with m/ z 791.5 after deletion of this gene.[ 7] We show here that strains in which salE is deleted from the salinomycin cluster actually produce two major components, E15 (2) and E16 (3), the structures of which confirm the predicted site-specific alteration in salinomycin.
These data suggest that the histone H3 methylation patterns in the KRT13 promoter of the poorly differentiated OSCC cell lines (HSC3 and SAS) are distinct from those of the HaCaT and HSC4 cells and that the aberrant targeting of PRC2 to the KRT13 promoter may cause this site-specific alteration.
Analysis of human fibroblasts utilizing the Infiniun HumanMethylation27 Assay, which investigates methylation levels at approximately 27,000 CpG loci, identified both site specific and regional alterations of methylation levels when comparing younger (<23 years old) with older (>65 year old) individuals [ 10].
Similarly, the delitto perfetto approach is a two-step cloning-free technique to introduce site-specific genetic alterations or specific deletions up to 200 base pairs.
They described patterns consistent with the reversal of changes in methylation intensity after smoking cessation and suggested the existence of dynamic, reversible site-specific methylation alterations due to active smoking.
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