Sentence examples for simultaneous alignments from inspiring English sources

Both forward and reverse complements of the sequence words are tested in each alignment and up to two simultaneous alignments to the PWM are tested.

An experiment based on all identified DS cases listed in Table S4 and Table S5 was performed to determine the simultaneous alignment quality of TM-align on both domains of DSCO pairs.

The updated sequence was submitted to GenBank [ U79413] The protein sequences of the bovine, human and mouse BPI-like genes were aligned using the SATCHMO (Simultaneous Alignment and Tree Construction using Hidden Markov mOdels) [ 34] with a window size of 13.

One potential approach to this issue is simultaneous alignment and tree estimation.

Additionally, we conducted simultaneous alignment and topology inference in a Bayesian framework using BAli-Phy for both the Apis and Solenopsis OBPs (AmOBPs; [4] and SiOBPs, respectively).

Environmental sampling holds the key to many focal questions in mycology, and simultaneous alignment and tree estimation, as performed by SATé, can be a highly efficient companion in that pursuit.

One novel approach is simultaneous alignment and tree estimation, such as that performed by SATé, a recently released program [21] [22] that unites the inference of optimal multiple alignments and phylogenetic trees into a single process, thereby eliminating manual examination of MSAs for molecular ecological inference.

LocARNA performs Sankoff-style simultaneous alignment and folding (Sankoff, 1985).

We presented a novel method for simultaneous alignment and folding of RNAs.

One is the Sankoff problem of simultaneous alignment and folding of two RNA sequences, introduced already above.

For this reason, several derivatives of the Sankoff-based approach [ 29] of simultaneous alignment and folding have been introduced.