Sentence examples for simulations of gene from inspiring English sources
Bash script used to perform simulations of gene family evolution.
This, in combination with computer simulations of gene knock-outs or knock-ins in the stoichiometric model, can identify attractive targets for metabolic engineering in the organism [ 20].
It is worth noting that this detection differs from a previously published work on the dynamical simulations of gene perturbations instead of the former simulations purely topology based approach [ 11].
IMa uses Markov Chain Monte Carlo (MCMC) simulations of gene genealogies to estimate the divergence time (t), genetic diversities (θ 1, θ 2, and ancestral θ) and migration rates (m 1 and m 2 ) for two populations.
In spite of the initial positive findings, further experiments on S. cerevisiae showed little correlation between protein degree and essentiality [ 126], a finding strengthened by computer simulations of gene expression [ 127].
Calculation of gene expectations from Equation (1): E gkr = P gkN kr.. Simulations of gene counts are drawn from Negative Binomial distributions: X gkr ~ NB (size, E gkr ) with size = 10.
MAMA optimizes parameters automatically to maximize the accuracy of simulation of gene expression.
Simulation of gene expression was performed using a support vector machine and based on the presence of predicted motifs and motif pairs.
When the number of motif pairs used in MAMA was set to N mp, motif pairs with the top N mp lowest P-value were used for the simulation of gene expression.
Current approaches for the analysis of gene expression data include clustering the individual expression measurements and relating them to biological functions as well as modelling and simulation of gene regulation processes by additional computer tools.
From its inception twenty years ago, APSIM has evolved into a framework containing many of the key models required to explore changes in agricultural landscapes with capability ranging from simulation of gene expression through to multi-field farms and beyond.
