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This chapter explores simulation options.
These are just two of many negotiation simulation options available through the TNRC.
In addition to many simulation options, it is provided with a user-friendly graphic interface.
Besides providing different simulation options, SimHPN offers the possibility of computing steady state throughput bounds for continuous nets.
Specifically, different settings of simulation options in MATLAB ordinary differential equation (ODE) solvers may lead to different simulation results (e.g., failure and success).
The validation approach used does not allow for fine tuning the simulation model by trial and error and includes a sensitivity analysis on the impact of different simulation options such as: number of thermal zones, ground heat transfer and accuracy of solar radiation data.
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An example of the output page of the query "shikonin" (a constituent compound of "Lithospermum erythrorhizon") with the docking simulation option in the "Target prediction" component.
Figure 5 shows an example of the output page of the query "shikonin" (a constituent compound of "Lithospermum erythrorhizon") with the docking simulation option in the "Target prediction" component.
Because the number of candidate parents differed between years, critical Delta-scores were calculated on an annual basis using the simulation option in Cervus.
The Web interface also provides tables, which compare simulation option and parameter values, modeled process submodels and categories of predicted phenotypes (e.g. metabolite concentrations, protein copy numbers) or states.
To evaluate our linkage results, we used Merlin's simulation option to empirically estimate the probability that the observed proportion of the genome that showed excess allele sharing could be observed by chance.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com