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Experiment simulation in each direction gives the following results (shown in Table 2).
The MRI simulation in each motion phase was performed using MRiLab [24], an open-source software based on MATLAB.
Based on the direction finding results in the second simulation in each Monte Carlo run, the algorithm via (36) is used to estimate the polarization parameters.
For accuracy of evaluation, simulation in each scenario would be repeated 100 times with random redistribution of CR node locations in each time.
After DA from the S1 site reached the intracellular side, the system was further equilibrated with 15 ns MD simulation in each of them.
QVAL and LFDR do not always outperform BH method when repeating simulation in each scenario as they have much bigger interquartile range in the boxplot (Additional file 9).
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We perform 10,000 simulations in each modeled scenario.
Thus, the minimum value of each error bar corresponds to the 5th percentile of the HOSR values obtained in the simulations in each iteration.
Each of these short NPT simulations in each cycle have several tens ps simulation length separately, while the temperature in each cycle is periodically increased from 250 to 650 K and then decreased again to finish a cycle.
To explore the effect of these ties on the number of accessible paths, I performed 10,000 simulations, in each case randomly breaking each tie.
To do so, we performed 1000 random simulations — in each simulation, the observed GBM network was locally rewired, such that all genes had exactly the same number of connections as before, but the choice of interaction partners was random [29].
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com