We simulate reticulate networks using a scheme similar to the coalescent simulation implemented in program ms (Hudson, 2002).
"Simulation results" section describes the simulation implemented to validate the solution and the obtained results are presented.
A software simulation implementing the above mentioned algorithm has been also developed and described together with an early experimentation case.
FPGA-based fault emulation, which is fault simulation implemented in FPGA, is an efficient way to accelerate fault simulation process.
All of the analyses were conducted using MCMC simulation implemented in WinBUGS 1.4.3 software [ 17].
Variance-covariance matrices were compared using the random skewers method [ 82, 86], run through a Monte-Carlo simulation implemented by PopTools [ 58].
To determine if patterns of allele frequency differentiation between the Closed and Reopened patterns could occur in the absence of selection, we performed coalescent simulation implemented in the program ms (Hudson 2002) (see details in File S1).
This level was established as being equivalent to a corrected probability level of P < 0.05 for the volume of the MTL using a Monte Carlo simulation (implemented in the AlphaSim tool in AFNI).
This simple rule leads to clustered axonal projections over separate patch systems, as shown in Figure 9 B. A video of a simulation implementing this growth rule is included as Supplementary Movie 6.
In addition to the analytical analysis, we have also carried out comprehensive simulations implemented by network simulator NS2 [10] to evaluate the performance of the proposed schemes.
