Sentence examples for simulation and refinement from inspiring English sources

DynamicME: dynamic simulation and refinement of integrated models of metabolism and protein expression, BMC Systems Biology 13:2019019).

The initial load response is also well predicted by the simulation and refinement of the material characterisation process is proposed to improve the models accuracy over the full range of crushing.

However, these connection means usually do not provide enough flexibility to select and tune the right conversion semantic in a mixed-level specification, simulation, and refinement process.

I-TASSER undertakes threading, utilising profile-profile alignment, followed by structure assembly simulation and refinement [46].

Protein sequences were modeled using the I-TASSER server, using robust alignment procedures followed by simulation and refinement of subsequent models [46].

XZ designed, implemented, and ran all simulation and refinement methods; XZ and BMEM collaborated closely in the elaboration of the project, the analysis of the data, and the writing of the manuscript.

In the past decade, progress in hardware development, improvement in simulation methodologies and refinement of interaction potentials have rendered the possibility to model increasingly complex processes that were intractable previously (Karplus and Kuriyan, 2005).

As part of ongoing simulation developments and refinement of reflective learning methods with these students, a small-scale pilot project was undertaken to evaluate the use of a portable reflective simulation framework (RSF) as a structured tool and technique to support and maximize learning aligned to curricula outcomes.

From the 4 candidates of the Lq2-K+ channel binding models, we identified a good three-dimensional model of Lq2-K+ channel complex through triplet contact analysis, electrostatic interaction energy estimation by BD simulation and structural refinement by molecular mechanics.

The other model was built for ChR2 using homology modeling on the ASR template, global sampling with classical force-field MD simulations, and structural refinement by combined QM/MM methods.

The new program OPAL for molecular dynamics simulations and energy refinements of biological macromolecules.