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Blast significantly mapped around 30percentt of these unmapped reads.
A process network was significantly mapped, if its FDR value was smaller than 0.05 [ 20].
A GO term was significantly mapped if its corrected P value was still smaller than 0.05.
Regions within the genome significantly mapped back onto are identified as potential protein-DNA interaction sites or peaks [ 11].
In these significantly mapped GO terms, five of them were related to ribosome: ribonucleoprotein complex, ribosome, cytosolic ribosome, ribosomal subunit, and cytosolic large ribosomal subunit.
Using only significantly mapped pathways (p value <= 0.05), 5 pathways were overlapped, which is 55.6% of the 14 significant pathways of the mRNA genes affected by RDX.
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The modules cover key conceptual domains pertinent to research ethics systems and questions on the survey significantly map onto the 8 domains of the Octagon model.
Inhibin β-B (Inhbb), which was found down regulated in FL1 ovaries compared to those of the control, significantly maps to GO terms related to oocytes and follicle development.
Most significantly, genes mapped to biological processes of the steroid and/or lipid metabolism.
Results: We present the mapping software, named PerM (Periodic Seed Mapping) that uses periodic spaced seeds to significantly improve mapping efficiency for large reference genomes when compared with state-of-the-art programs.
A QTL significantly associated was mapped to the DXMit166 marker (15.5 cM, LOD = 3.86, p<0.01) in the reciprocal cross population (C3HB6F2).
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