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Significant matches (E < 1e-5) were analyzed to find homologs in other streptococcal genomes.
Significant matches were found to 417 mRNA sequences, which had no map coordinates on build 36.
In Fig. 1 the effect of the sequence length on the percentage of significant matches in BLASTx results is reported.
Additionally, there were numerous significant matches between regions of non-silk-protein-coding sequence.
This search returned 69 significant matches.
714 of the unigenes (54.75%) had significant matches (Table 1).
No significant matches are found with other known proteins.
However, these searches returned no significant matches (E < 1e-5).
No significant matches were identified for VNTR-3.
No significant matches were found in Saccharomyces (data not shown).
Sequences without significant matches were used as putative precursor miRNAs.
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