Sentence examples for significant alignment with from inspiring English sources

All the genes not producing a significant alignment with the genome or aligned to unassembled contigs, where the annotation was not available, were classified respectively as "not aligned" and "contig".

Thus, if the first significant alignment with a library sequence aligns residues 25 125 at iteration i, later alignment boundaries at iteration i +1 and beyond are ignored; only the initially aligned region (25 125) is used to form the PSSM.

When submitted to protein sequence alignment, this peptide showed only one significant alignment with gastrokine-1 (GKN1).

A combination of protein sequence alignment, and the correlation score with the subtype that gave most significant alignment with other subtypes was used to identify invariant regions.

Amino acid sequencing of other peptides derived from limited trypsin cleavages and purified by HPLC were included and showed a significant alignment with the recently deduced gastrokine-1 sequence ("Figure 2").

Most significant alignment with lowest E-value from each of the organisms were considered with the threshold of >50% in terms of either maximum identity or query coverage.

Table 1 The list of fungal strains along with their respective GenBank accession number, and their identity score, that produce significant alignments with the query consensus sequence (CS) achieved from isolated Beauveria bassiana Accession no.

Sequences that produced significant alignments with chemokines were identified as putative chicken chemokine sequences.

These revealed consistent intra- and inter-pseudomolecule variation in the relative concentrations of significant alignments with the tested plant databases.

Finally, significant alignments (with E-value less than the optimal E-value) were used to construct the PSN.

In total, we identified 1,156 known Arabidopsis gametophyte genes that produced significant alignments with Pteridium unigenes in our blastx search.