Rolling a cigarette butt to shreds between his fingers, Lynch offered another analogy.
There are a total of 26 ShReDs involving R24 or R31, including the ShReD between R24 and R31 (ShReD24,31).
This calculation assumed that the overall ShReD distribution is close to normal, and that the arithmetic average reasonably represents the expected ShReD between two nodes.
We found only nine down-regulated DEGs that are shred between the two datasets, including those of p26, superoxide dismutase, and several ribosomal proteins (Additional file 2).
The desired modularity matrix V has a positive entry Vij if the corresponding ShReD between a pair of reaction nodes is small relative to the expected ShReD, whereas it has a negative entry if the corresponding ShReD is large.
(4) V ij = ln p ij 1 − p ij In equation 4, pij is the fraction of all weighted ShReDs involving reaction Ri or Rj that is longer than the ShReD between Ri and Rj (ShReDij).
Therefore, in this study we introduce a modified modularity matrix V, which ranks the ShReD between two reaction nodes relative to the distribution of all ShReDs involving either one of the two reaction nodes.
As a result, the weighted ShReD between these two reactions traverses an alternate sequence of reaction nodes, comprising 10 reactions spanning parts of glycolysis and the TCA cycle, 2-oxoglutarate synthesis, and glutamate synthesis (Additional file 1: Figure S2).
Once it is over, at last, Glass is in shreds, strung between life and death.
4. Riedizioni place mats, by Louisa Cevese of Milan, have random patterns of salvaged shredded fabric between two layers of flexible polyurethane TechnoGel.
