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Two major clades are shown in the tree: MPH clade and OPHC2 clade.
The sequences from India, Vietnam and Bangladesh fell into all of the major clades, that is not found in case of other countries as shown in the tree.
All the possible paths are shown in the tree as the paths to the leaf nodes where all the leaf nodes denote the destination node.
The G2j clade was composed of 65 sequences from Venezuela, 4 from Canada and 5 from France (two of each shown in the tree).
However, the ML analysis suggests additional interclade relationships, as shown in the tree in Figure 1.
The I-VIII groups of the Adhesion family based on phylogeny [ 14] are shown in the tree.
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Examples of possible basis sets are shown in the trees in Fig. 4.
The occurrence of the orthologous introns of the most widely distributed Pcl K is shown in the trees (Figure 4).
It is not clear which ORFs are meant in the YSLV sequences, I would include accession numbers for all individual sequences shown in the trees.
Both resulting trees were concordant with the accepted phylogeny for freshwater planarians [ 38- 40] (support values shown in the dating tree are in Additional file 4).
Paralogues arising from segmental duplications are shown in the phylogenetic tree diagrams.
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