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Regions showing gain or loss in >5% of all samples were called as CNPs (Table S3).
Our work provides clues for functional studies that will aim at showing gain or loss of function.
We evaluated the following three ways of framing the information: 1. positively framed information showing gain over 10 years (positive framing for 10 years); 2. negatively framed information showing loss over 10 years (negative framing for 10 years), and 3. negatively framed information showing loss per year over 10 years (negative framing per year) (Figure 2).
In addition, the web-based application allows for sending the sets of genes showing gain, loss, and CNA (gain or loss) to our tool PaLS (http://idclight.bioinfo.cnio.es) to examine PubMed references, Gene Ontology terms, KEGG pathways or Reactome pathways that are common to a user-selected percentage of genes.
Other regions occasionally showing gain and loss of chromosome regions are summarized in Figure 5A.
Half of these tumours, showing gain of 1q, were from children.
Similar(38)
It was not alone in showing gains.
Even department stores, a sector that had been struggling for years, are showing gains.
An analysis of both tests suggests, but does not prove, progress in minority education, with whites also showing gains.
Sales of private jets have been showing gains each month since hitting a low point in July.
In contrast, nameplates like the Chrysler Pacifica, Chevy Equinox, Nissan Murano, Honda Pilot and Lexus RX 330 are showing gains.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com