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We show this tree in Figure 1.
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To claim an effect, though, you would have to show that this tree is significantly different from ordinary trees.
The individual gene trees show this pattern, as well as illustrating differences in the resolution of whole genome duplication events.
Maximum likelihood and Bayesian consensus trees show this new genus is most closely related to a clade of African genera (Capensibufo, Mertensophryne, Vandijkophrynus, and Nimbaphrynoides) but this relationship is not strongly supported (Fig. 3).
The selected streams starting from macro streams, M_1 and M_2, have lower sum rate contributions, so that they are not shown in this tree due to the limited space of the paper.
This could explain the chemical patterns shown for this tree (Table 2).
Indeed, 6 independent convergent events are extremely unlikely, but the number 6 seems to be derived from counting the groups of Na+ pumping ATPases in Fig. 5. Cursory inspection shows that this tree is as unreliable as should be expected for a tree-of-life based on a single molecule.
Their findings match a separate team's study earlier this year that used satellite imagery and tree rings to also show that trees in this region are growing faster, but that survey extended only to 1982.
Figure 7 shows this for selected tree species (1 21).
Nevertheless, it still seems sensible to say that E. coli K12 and O157 H7 are more closely related to each other than either is to Yersinia pestis, and that a rooted tree showing this represents some sort of useful historical truth about diverging populations, just as a tree-like pattern that has humans and chimps as a clade to the exclusion of lemurs depicts an important evolutionary reality.
We show that computing this tree is NP-hard in general.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com