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As the energy approaches 1,200 eV this spread becomes smaller corresponding to shorter error bars.
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We assume that flows suffer from short error bursts.
They found that the shortest error event achieving has the type of for most of partial response channels.
As a rule of thumb, the number of columns is chosen slightly larger than the length of the shortest error event of the code.
Seemingly plausible, this turns out to be a bad strategy, since segmenting the trellis into small chunks significantly increases the number of short error events, and consequently incurs a loss in performance.
Alternatively, one may also interpret it as: ideal LDPC codes have large minimum distances and are capable of correcting short error events including those caused by the segmentation effect.
The nature of current RNA-Seq, resulting in short error prone reads, alignment artifacts, bias introduced by the library construction process etc., introduces noise into this already difficult problem.
However, analysis of HTS data from virus populations is challenging due to short, error-prone reads.
wcd is an open-source program which can be used to cluster large sets of ESTs, and is adaptable to shorter length error prone novel sequence technologies such as Solexa and 454.
ESTs were processed using the ParPEST (Parallel Processing of ESTs) pipeline [ 26] that has been tweaked in order to properly manage shorter length error prone sequences, such as 454 EST reads.
One can have longer period errors while the other can have shorter period errors.
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