Sentence examples for shift analysis with from inspiring English sources

To elucidate the mechanism of multimeric assembly, we have devised two rapid and broadly applicable strategies for examining cooperative interactions between proteins bound to RNA, one based on cooperative translational repression of a two-site reporter and the other on gel shift analysis with crude E. coli extracts.

Five of the RARE half-sites had the minimal spacer nucleotide requirement for functionality and DNA mobility shift analysis with different pairs of the RARE half-sites and supershift studies using antibodies against RAR-beta showed significant binding of nuclear protein complexes from RA-treated cells to these RAREs.

Ligand-chromatography combined with liquid chromatography-tandem mass spectrometry analyses indicated direct interactions of prohibitin and/or prohibiton with the (TGYCC 15 motif, which was confirmed by electrophoretic mobility shift assay and super-gel shift analysis with anti-prohibitin and anti-prohibiton antibodies.

Yokochi et al. [50] have already performed gel shift analysis with hDNMT1 and mDNMT3a on 21 pb long duplexes, revealing multiple protein-DNA complexes, with 1, 2, 3 or 4 proteins bound to the duplex.

Gel-shift analysis with soluble c23 TCR and HLA-A68-ITKGLGISYGR showed that >90% of the c23 TCR bound to its cognate ligand (Fig. 2B).

(B ) Venn diagram showing the overlap (645 mRNAs) between translational target mRNAs identified in the polysomal shift analysis (1576) with mRNAs shown to be bound directly by SRSF1 in a CLIP experiment (9094) (Sanford et al., 2009 ).

Cdc5 deletions are stable, CD spectrum of Cdc5-D3, labeled 2D HSQC of Cdc5-D3, structure structure analysis of Cdc5 N-terminal domains, the N-terminus of Cdc5 binds to DNA in vitro, and chemical shift analysis of Cdc5-D3 with ssRNA and MS2-dsRNA.

It is observed that unlike the binary alloy system, the stacking fault probability calculated from peak shift analysis is almost constant with increase in zinc concentration from 10to2020 wt.% and thereafter increases with the increase of zinc concentration.

Chemical shift analysis of the backbone resonances with the TALOS+ algorithm [ 60] predicts Φ and Ψ torsion angles of (88, −7) for Gly in the major slow exchange state {X-ray structure [ 30] yields (103, −28)}, while torsion angles of (−59, −27) are predicted for the minor slow exchange state.

(D) The sequences of CTCF binding motif 2. (E) Gel mobility shift analysis of GST-CTCF-ZFs protein with M2 motif.

Note that this is also consistent with the Doppler shift analysis done by Leisner et al. (2011) on the 2006 MAG data and the hybrid simulation near Enceladus' orbit done by Cowee et al. (2009).